Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3320

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3319: 11687 - KOG3854 SPRT-like metalloprotease, at 386428 to 389154 11687 mRNA_3320: 11688 - KOG2493 Na+/Pi symporter, at 389310 to 390792 11688 mRNA_3321: 11689 - Hypothetical Protein, at 391300 to 392689 11689

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
388,502 + 11687 mRNA_3319 0.76 -0.4
388,629 + 11687 mRNA_3319 0.81 0.0
388,632 + 11687 mRNA_3319 0.81 0.0
388,638 + 11687 mRNA_3319 0.81 1.0
388,790 + 11687 mRNA_3319 0.87 -0.5
388,930 - -0.7
388,931 + 2.4
389,219 + 1.9
389,236 - 0.6
389,260 - 0.3
389,269 + 0.5
389,271 + -0.6
389,273 - -0.9
389,280 - 0.8
389,280 - -0.9
389,282 + 1.6
389,293 + -0.2
389,344 + 0.6
389,378 + 0.8
389,395 - 0.7
389,407 + -0.3
389,409 - 1.2
389,411 + -0.1
389,411 - 0.5
389,413 - -0.4
389,424 + 0.9
389,425 - 0.2
389,520 + 11688 mRNA_3320 0.14 -0.6
389,568 + 11688 mRNA_3320 0.17 1.8
389,612 + 11688 mRNA_3320 0.20 -0.5
389,684 + 11688 mRNA_3320 0.25 1.1
389,779 - 11688 mRNA_3320 0.32 1.4
389,864 + 11688 mRNA_3320 0.37 -1.4
390,296 + 11688 mRNA_3320 0.66 -1.6
390,299 - 11688 mRNA_3320 0.67 -0.4
390,434 - 11688 mRNA_3320 0.76 -1.8
390,460 + 11688 mRNA_3320 0.78 1.0
390,489 + 11688 mRNA_3320 0.80 0.3
390,634 + 11688 mRNA_3320 0.89 0.2
390,868 - -0.6
391,158 - -1.5
391,320 - 3.0
391,526 - 11689 mRNA_3321 0.16 0.1
391,668 - 11689 mRNA_3321 0.26 0.6
391,789 + 11689 mRNA_3321 0.35 0.4