Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3094

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3093: 11461 - Hypothetical Protein, at 304363 to 305282 11461 mRNA_3094: 11462 - HMMPfam-Bestrophin, RFP-TM, chloride channel-PF01062, at 305611 to 307227 11462 mRNA_3095: 11463 - K01739 metB cystathionine gamma-synthase, at 307460 to 310020 11463

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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304,687 - 11461 mRNA_3093 0.35 -0.0
304,695 + 11461 mRNA_3093 0.36 -0.2
304,753 + 11461 mRNA_3093 0.42 0.6
304,926 - 11461 mRNA_3093 0.61 0.8
304,959 + 11461 mRNA_3093 0.65 -0.3
304,999 + 11461 mRNA_3093 0.69 0.5
305,056 - 11461 mRNA_3093 0.75 0.0
305,060 - 11461 mRNA_3093 0.76 1.3
305,077 - 11461 mRNA_3093 0.78 -0.1
305,208 + -0.1
305,211 - -0.1
305,219 + 0.1
305,223 + 0.5
305,339 - 0.2
305,364 + -1.4
305,365 + -0.7
305,367 + 0.9
305,369 + 0.1
305,376 - -2.1
305,377 + 0.8
305,378 - -0.0
305,381 - 1.5
305,381 - -0.1
305,470 + 1.9
305,481 - 2.4
305,483 + 1.8
305,492 + -0.0
305,492 + 0.6
305,508 + 0.1
305,508 - 0.6
305,512 - -2.6
305,513 - -0.6
305,516 - -0.7
305,516 + 0.7
305,520 - -0.7
305,522 + 0.4
305,524 - -0.2
305,535 - 0.2
305,542 + 1.7
305,562 - -0.4
305,628 + 0.6
305,636 - -0.4
305,660 - 0.4
305,664 - -0.3
305,680 + 2.4
305,683 - -0.1
305,687 + 0.5
305,694 - -0.4
305,725 - 0.6
305,797 - 11462 mRNA_3094 0.12 1.0
305,803 - 11462 mRNA_3094 0.12 -0.3
305,816 + 11462 mRNA_3094 0.13 -0.0
305,834 - 11462 mRNA_3094 0.14 0.2
305,847 + 11462 mRNA_3094 0.15 1.9
305,848 + 11462 mRNA_3094 0.15 -0.4
305,876 - 11462 mRNA_3094 0.16 0.5
305,931 - 11462 mRNA_3094 0.20 1.3
305,979 + 11462 mRNA_3094 0.23 -0.1
305,989 + 11462 mRNA_3094 0.23 0.6
306,002 - 11462 mRNA_3094 0.24 -0.1
306,112 + 11462 mRNA_3094 0.31 -0.2
306,128 + 11462 mRNA_3094 0.32 -0.5
306,252 - 11462 mRNA_3094 0.40 -0.8
306,353 + 11462 mRNA_3094 0.46 -0.2
306,724 + 11462 mRNA_3094 0.69 0.5
306,852 - 11462 mRNA_3094 0.77 0.3
306,857 - 11462 mRNA_3094 0.77 0.5
306,973 - 11462 mRNA_3094 0.84 1.7
307,007 - 11462 mRNA_3094 0.86 0.0
307,139 - 0.4
307,145 + -0.2
307,151 + 1.7
307,152 - 0.1
307,259 - 0.1
307,268 - 0.9
307,269 + -0.1
307,271 + 0.2
307,273 - 1.4
307,273 - 0.1
307,274 + 0.5
307,278 + -0.8
307,281 + -0.1
307,284 - 0.1
307,288 + 1.5
307,290 + 0.9
307,294 + 0.6
307,294 + 0.0
307,294 - 0.4
307,297 + 0.5
307,297 - 0.6
307,300 + -0.2
307,302 + -0.1
307,303 - -0.3
307,304 + -0.1
307,305 + 0.7
307,305 + -1.2
307,308 - 0.4
307,312 - -1.8
307,326 + 1.1
307,332 + 0.5
307,333 + 0.4
307,336 - -2.2
307,344 + 0.5
307,353 + -0.4
307,408 + -0.7
307,449 + -0.4
307,475 - 0.1
307,621 - 0.1
307,728 - 11463 mRNA_3095 0.10 -0.9
307,765 - 11463 mRNA_3095 0.12 0.9
307,774 + 11463 mRNA_3095 0.12 1.2
307,776 + 11463 mRNA_3095 0.12 1.1
307,780 - 11463 mRNA_3095 0.12 -1.1
307,781 + 11463 mRNA_3095 0.13 0.4
307,902 - 11463 mRNA_3095 0.17 0.2
308,226 - 11463 mRNA_3095 0.30 0.0