Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3077

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3076: 11444 - KOG4497 Uncharacterized conserved protein WDR8, contains WD repeats, at 261811 to 264179 11444 mRNA_3077: 11445 - K07542 PIGV phosphatidylinositol glycan, class V, at 264209 to 265729 11445 mRNA_3078: 11446 - K01613 psd, PISD phosphatidylserine decarboxylase, at 265905 to 270528 11446

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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263,261 - 11444 mRNA_3076 0.61 -1.5
263,337 + 11444 mRNA_3076 0.64 -1.1
263,497 + 11444 mRNA_3076 0.71 -0.3
263,640 - 11444 mRNA_3076 0.77 0.9
263,682 - 11444 mRNA_3076 0.79 2.4
263,685 + 11444 mRNA_3076 0.79 0.7
263,846 - 11444 mRNA_3076 0.86 1.4
264,076 - 0.1
264,076 - 0.5
264,110 + -0.2
264,131 + 1.2
264,256 + -0.5
264,278 + -0.0
264,278 + 0.1
264,282 + 1.6
264,369 - 11445 mRNA_3077 0.11 -0.7
264,402 + 11445 mRNA_3077 0.13 0.2
264,706 - 11445 mRNA_3077 0.33 0.5
264,758 - 11445 mRNA_3077 0.36 -1.9
264,817 - 11445 mRNA_3077 0.40 1.5
264,867 - 11445 mRNA_3077 0.43 0.5
264,868 + 11445 mRNA_3077 0.43 0.9
264,880 + 11445 mRNA_3077 0.44 0.2
264,914 - 11445 mRNA_3077 0.46 0.2
265,060 - 11445 mRNA_3077 0.56 1.5
265,094 + 11445 mRNA_3077 0.58 -3.4
265,114 + 11445 mRNA_3077 0.60 1.4
265,122 + 11445 mRNA_3077 0.60 -0.1
265,137 - 11445 mRNA_3077 0.61 -0.5
265,148 - 11445 mRNA_3077 0.62 0.4
265,153 + 11445 mRNA_3077 0.62 -0.5
265,160 - 11445 mRNA_3077 0.63 0.1
265,180 - 11445 mRNA_3077 0.64 1.2
265,258 + 11445 mRNA_3077 0.69 0.5
265,296 + 11445 mRNA_3077 0.71 -0.4
265,340 - 11445 mRNA_3077 0.74 0.6
265,415 - 11445 mRNA_3077 0.79 -0.5
265,426 - 11445 mRNA_3077 0.80 0.3
265,433 - 11445 mRNA_3077 0.80 -1.0
265,437 - 11445 mRNA_3077 0.81 1.2
265,437 - 11445 mRNA_3077 0.81 -0.2
265,447 + 11445 mRNA_3077 0.81 0.2
265,545 - 11445 mRNA_3077 0.88 1.2
265,602 + 0.1
265,605 + 1.2
265,611 + -0.5
265,625 - 0.4
265,724 + 0.7
265,731 - -0.1
265,738 - 0.3
265,740 - 1.5
265,748 - 0.5
265,758 - 0.3
265,890 - 2.2
265,905 + -0.1
265,915 - 0.4
266,184 + 0.0
266,494 - 11446 mRNA_3078 0.13 -0.9
266,538 + 11446 mRNA_3078 0.14 -0.8
266,610 + 11446 mRNA_3078 0.15 1.8
266,642 - 11446 mRNA_3078 0.16 0.7