Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3076

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3076: 11444 - KOG4497 Uncharacterized conserved protein WDR8, contains WD repeats, at 261811 to 264179 11444 mRNA_3077: 11445 - K07542 PIGV phosphatidylinositol glycan, class V, at 264209 to 265729 11445

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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260,815 + -1.0
260,966 + 1.9
261,095 - -0.8
261,242 - 0.5
261,260 + -0.6
261,261 - -0.2
261,265 + 0.5
261,269 - -0.9
261,390 - -0.2
261,391 + -0.6
261,396 - -0.2
261,400 - -0.3
261,400 - 1.7
261,401 + -1.3
261,412 - 1.2
261,415 + 0.8
261,419 + 0.2
261,420 + -0.9
261,420 - 0.3
261,427 - -0.0
261,427 + 0.2
261,428 - 0.3
261,429 + 2.1
261,432 - -0.4
261,438 - 0.5
261,440 - 0.0
261,440 - 0.1
261,442 - -0.2
261,442 - 1.3
261,443 - 0.7
261,443 - -0.9
261,445 - -0.8
261,449 + -1.9
261,449 + 0.1
261,451 - -0.1
261,454 - -0.7
261,456 - 1.1
261,459 + 0.1
261,478 + -0.5
261,571 + 0.7
261,573 - 0.1
261,730 - -0.3
261,757 - -0.2
261,762 + 2.1
261,762 - 1.1
261,762 + -0.0
261,765 + 0.9
261,766 + 0.1
261,766 + -0.1
261,767 + -0.0
261,767 - -0.6
261,767 - 0.5
261,773 + 1.0
261,775 + -0.1
261,776 - 0.3
261,777 + -0.9
261,778 - 0.3
261,786 - 0.1
261,787 + -0.3
261,803 + 0.0
261,809 + -0.9
261,899 + 0.5
261,911 - 0.6
261,918 - 0.9
261,921 + -1.1
261,921 + -0.7
261,930 + -0.4
261,930 - 0.5
261,936 + 0.0
261,937 + 0.3
262,066 + 11444 mRNA_3076 0.11 1.3
262,193 - 11444 mRNA_3076 0.16 0.4
262,228 + 11444 mRNA_3076 0.18 0.5
262,369 + 11444 mRNA_3076 0.24 1.4
262,493 + 11444 mRNA_3076 0.29 0.1
262,497 - 11444 mRNA_3076 0.29 -0.0
262,506 - 11444 mRNA_3076 0.29 0.2
262,608 - 11444 mRNA_3076 0.34 -0.9
262,770 + 11444 mRNA_3076 0.40 -0.8
262,916 - 11444 mRNA_3076 0.47 -0.1
262,940 + 11444 mRNA_3076 0.48 -0.7
263,089 + 11444 mRNA_3076 0.54 0.3
263,096 - 11444 mRNA_3076 0.54 0.1
263,103 - 11444 mRNA_3076 0.55 0.9
263,261 - 11444 mRNA_3076 0.61 -1.5
263,337 + 11444 mRNA_3076 0.64 -1.1
263,497 + 11444 mRNA_3076 0.71 -0.3
263,640 - 11444 mRNA_3076 0.77 0.9
263,682 - 11444 mRNA_3076 0.79 2.4
263,685 + 11444 mRNA_3076 0.79 0.7
263,846 - 11444 mRNA_3076 0.86 1.4
264,076 - 0.1
264,076 - 0.5
264,110 + -0.2
264,131 + 1.2
264,256 + -0.5
264,278 + -0.0
264,278 + 0.1
264,282 + 1.6
264,369 - 11445 mRNA_3077 0.11 -0.7
264,402 + 11445 mRNA_3077 0.13 0.2
264,706 - 11445 mRNA_3077 0.33 0.5
264,758 - 11445 mRNA_3077 0.36 -1.9
264,817 - 11445 mRNA_3077 0.40 1.5
264,867 - 11445 mRNA_3077 0.43 0.5
264,868 + 11445 mRNA_3077 0.43 0.9
264,880 + 11445 mRNA_3077 0.44 0.2
264,914 - 11445 mRNA_3077 0.46 0.2
265,060 - 11445 mRNA_3077 0.56 1.5
265,094 + 11445 mRNA_3077 0.58 -3.4
265,114 + 11445 mRNA_3077 0.60 1.4
265,122 + 11445 mRNA_3077 0.60 -0.1
265,137 - 11445 mRNA_3077 0.61 -0.5
265,148 - 11445 mRNA_3077 0.62 0.4
265,153 + 11445 mRNA_3077 0.62 -0.5
265,160 - 11445 mRNA_3077 0.63 0.1