Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3059

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3059: 11427 - Hypothetical Protein, at 217589 to 219191 11427 mRNA_3060: 11428 - K13115 CCDC130 coiled-coil domain-containing protein 130, at 219691 to 221317 11428

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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216,674 + 0.5
216,742 + 0.2
216,837 - 2.3
216,865 - -0.4
216,868 - 0.5
216,879 + 0.4
216,882 + 0.4
216,884 - -0.4
217,004 + -0.0
217,009 - -0.7
217,011 - -0.9
217,029 - -0.5
217,032 + 0.4
217,035 - 0.6
217,037 + -0.7
217,038 + 1.2
217,045 - 2.0
217,152 - -1.2
217,173 + 0.5
217,193 + 0.2
217,252 - -0.0
217,317 + 0.5
217,461 - 0.7
217,464 + 1.3
217,470 - 0.8
217,470 - -0.1
217,475 + 1.7
217,636 + 0.9
217,909 + 11427 mRNA_3059 0.20 1.8
217,927 - 11427 mRNA_3059 0.21 0.6
218,062 + 11427 mRNA_3059 0.30 -1.6
218,066 + 11427 mRNA_3059 0.30 -0.5
218,147 - 11427 mRNA_3059 0.35 0.1
218,168 + 11427 mRNA_3059 0.36 0.4
218,203 - 11427 mRNA_3059 0.38 0.2
218,447 - 11427 mRNA_3059 0.54 -0.5
218,618 + 11427 mRNA_3059 0.64 0.8
218,635 - 11427 mRNA_3059 0.65 -0.2
218,649 + 11427 mRNA_3059 0.66 0.4
218,747 + 11427 mRNA_3059 0.72 -0.0
218,798 - 11427 mRNA_3059 0.75 -0.5
218,892 - 11427 mRNA_3059 0.81 1.0
218,996 + 11427 mRNA_3059 0.88 -1.8
219,037 + -0.1
219,182 - 0.2
219,183 - -1.6
219,309 - 0.0
219,330 - -1.4
219,331 - -0.9
219,346 - -0.4
219,346 - 0.4
219,347 + -0.6
219,451 - -0.6
219,453 + 0.5
219,467 - -0.3
219,484 - 0.9
219,501 - -0.3
219,513 + 0.7
219,624 - 0.6
219,630 + -0.6
219,630 + -0.1
219,637 + 0.0
219,639 + 0.5
219,753 - -0.3
219,759 - -0.4
219,763 + 0.4
219,765 - 1.9
219,768 - -0.2
219,773 + -0.1
219,780 - -0.6
219,902 - 11428 mRNA_3060 0.13 0.8
219,902 - 11428 mRNA_3060 0.13 1.3
219,903 + 11428 mRNA_3060 0.13 0.6
219,908 + 11428 mRNA_3060 0.13 1.7
219,931 + 11428 mRNA_3060 0.15 0.5
220,038 - 11428 mRNA_3060 0.21 -0.1
220,082 + 11428 mRNA_3060 0.24 0.1