Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3034

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3034: 11402 - K05767 IQGAP2_3 Ras GTPase-activating-like protein IQGAP2/3, at 148393 to 151658 11402 mRNA_3035: 11403 - K03661 ATPeV0B, ATP6F V-type H+-transporting ATPase 21kDa proteolipid subunit, at 151976 to 152968 11403

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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147,413 - 0.9
147,524 - -0.4
147,799 + 0.5
147,977 + 1.5
147,990 - 1.1
148,016 + -0.7
148,026 + 0.9
148,031 + 0.4
148,040 + 0.0
148,065 + 0.2
148,093 - 1.1
148,118 - -0.2
148,122 - -0.3
148,132 - 0.3
148,142 + -0.2
148,142 + 2.8
148,299 - -0.4
148,301 - -0.0
148,422 + 1.5
148,428 + 0.1
148,453 + 1.4
148,582 - -0.6
148,700 + 1.3
148,727 + 11402 mRNA_3034 0.10 1.3
148,832 - 11402 mRNA_3034 0.13 0.2
148,992 + 11402 mRNA_3034 0.18 1.0
149,009 - 11402 mRNA_3034 0.19 0.4
149,018 - 11402 mRNA_3034 0.19 1.3
149,027 + 11402 mRNA_3034 0.19 -0.1
149,191 - 11402 mRNA_3034 0.24 0.3
150,187 - 11402 mRNA_3034 0.55 1.5
150,340 + 11402 mRNA_3034 0.60 -0.0
150,346 + 11402 mRNA_3034 0.60 0.3
150,889 - 11402 mRNA_3034 0.76 -0.4
151,009 + 11402 mRNA_3034 0.80 -1.5
151,253 - 11402 mRNA_3034 0.88 1.4
151,604 - 1.7
151,652 - 0.2
151,769 + 1.2
151,874 + 0.6