Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2954

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2954: 11322 - HMMPfam-Glycosyl hydrolase catalytic core-PF11790, at 640815 to 641841 11322

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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639,815 - 0.0
639,855 - 0.6
639,922 - 0.3
640,129 - 0.5
640,412 + -0.5
640,457 + 1.2
640,481 - 3.1
640,512 - 0.3
640,517 - -0.3
640,517 + 1.1
640,521 - 1.8
640,535 - 0.5
640,539 + 0.3
640,539 + 0.2
640,542 - -1.1
640,553 - 0.3
640,554 + 0.5
640,573 - -2.1
640,585 - 0.7
640,592 + 0.3
640,606 - -0.1
640,616 - 0.4
640,616 - 1.1
640,622 - 0.8
640,622 - 0.5
640,623 + -0.6
640,625 + -0.3
640,626 - -0.9
640,627 + -0.0
640,627 + -0.4
640,631 + -0.3
640,631 + -0.8
640,633 - 1.4
640,638 - 2.4
640,640 - -1.3
640,641 + 0.5
640,644 + 0.4
640,665 + 0.6
640,666 - -0.4
640,667 - 0.4
640,669 + 1.1
640,688 + -0.2
640,691 + 1.0
640,691 - 1.1
640,692 - 0.3
640,693 + 0.3
640,693 - 0.3
640,709 + 0.1
640,714 - -0.9
640,717 + 0.4
640,718 + 1.5
640,718 - 0.2
640,721 + -0.6
640,721 + 1.1
640,721 - 0.4
640,725 + 0.2
640,732 - -0.2
640,737 - -1.5
640,763 - 0.9
640,763 + -0.1
640,763 + -0.8
640,763 + -0.5
640,891 + -0.8
640,913 + 0.6
640,917 + -0.6
641,197 + 11322 mRNA_2954 0.37 -0.3
641,203 - 11322 mRNA_2954 0.38 -0.4
641,499 - 11322 mRNA_2954 0.67 -0.8
641,596 + 11322 mRNA_2954 0.76 0.4
641,608 - 11322 mRNA_2954 0.77 0.6
641,952 + -0.1
641,987 + -0.1
642,058 - 0.2
642,066 - 0.3
642,108 + -1.5
642,177 - 0.7
642,603 + -0.1
642,624 + 0.3
642,627 - 0.4