Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2949

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2948: 11316 - K12817 PRPF18, PRP18 pre-mRNA-splicing factor 18, at 625370 to 627125 11316 mRNA_2949: 11317 - K02267 COX6B cytochrome c oxidase subunit 6b, at 627743 to 628552 11317

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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627,196 - -0.7
627,208 - 0.9
627,213 - -0.5
627,215 + 2.5
627,217 + 0.2
627,218 + -0.7
627,224 + -0.5
627,341 - -1.6
627,347 - -0.8
627,353 - 1.6
627,354 + -1.0
627,361 + 1.3
627,374 + -0.4
627,379 + -0.8
627,517 + 0.7
627,533 + -0.3
627,643 - -1.2
627,644 - -0.6
627,670 + -1.2
627,949 + 11317 mRNA_2949 0.25 -0.3
627,949 - 11317 mRNA_2949 0.25 2.3
627,953 - 11317 mRNA_2949 0.26 0.8
628,022 + 11317 mRNA_2949 0.34 -2.3
628,379 - 11317 mRNA_2949 0.79 -0.4
628,381 + 11317 mRNA_2949 0.79 0.2
628,562 - -1.0
628,662 + 0.6
628,696 - 0.8
628,834 - 1.1
628,842 + 0.8