Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2899

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2898: 11266 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 483006 to 488500 11266 mRNA_2899: 11267 - K15276 SLC35B2, PAPST1 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2, at 488938 to 492084 11267

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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487,989 - 0.4
488,154 + -0.2
488,224 - -0.1
488,235 - 0.2
488,262 + -1.1
488,372 - 0.9
488,389 + -0.1
488,506 - -0.2
488,521 + 1.2
488,534 + -1.6
488,556 + -0.5
488,650 - 1.2
488,712 - -0.1
488,719 + -0.1
488,766 + 1.4
488,806 + -0.3
488,807 - 1.7
488,935 - -0.1
488,937 + 2.0
488,969 - -0.3
488,970 + -0.0
488,997 + 0.6
489,000 + -0.5
489,038 - 0.4
489,553 + 11267 mRNA_2899 0.20 -0.4
489,675 + 11267 mRNA_2899 0.23 2.0
489,773 + 11267 mRNA_2899 0.27 1.3
489,878 - 11267 mRNA_2899 0.30 0.2
489,970 - 11267 mRNA_2899 0.33 0.3
489,988 - 11267 mRNA_2899 0.33 1.7
490,005 - 11267 mRNA_2899 0.34 0.4
490,995 - 11267 mRNA_2899 0.65 0.1
491,034 + 11267 mRNA_2899 0.67 0.9
491,116 + 11267 mRNA_2899 0.69 1.3
491,250 + 11267 mRNA_2899 0.73 -0.3
491,363 - 11267 mRNA_2899 0.77 0.8
491,396 - 11267 mRNA_2899 0.78 0.6
491,402 + 11267 mRNA_2899 0.78 0.4
491,825 - 0.1
492,271 + 1.4
492,515 - 0.5
492,597 + -0.9
492,607 + 1.1
492,686 - 0.7
492,716 - 0.6
492,778 + 0.5
492,872 - 1.8
492,889 + -0.7