Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2876

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2875: 11243 - HMMPfam-NMT1/THI5 like-PF09084,SUPERFAMILY--SSF53850, at 420566 to 422079 11243 mRNA_2876: 11244 - K18715 NUP159 nucleoporin NUP159, at 422380 to 429450 11244 mRNA_2877: 11245 - Hypothetical Protein, at 429678 to 431024 11245

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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421,423 - 11243 mRNA_2875 0.57 1.5
421,590 - 11243 mRNA_2875 0.68 0.1
421,591 + 11243 mRNA_2875 0.68 0.3
421,870 - 11243 mRNA_2875 0.86 0.4
421,899 + 11243 mRNA_2875 0.88 1.6
421,899 + 11243 mRNA_2875 0.88 0.0
421,903 + 11243 mRNA_2875 0.88 -0.0
422,210 - -0.5
422,315 - -0.3
422,343 - 0.1
428,041 - 11244 mRNA_2876 0.80 1.1
428,258 - 11244 mRNA_2876 0.83 1.9
428,262 + 11244 mRNA_2876 0.83 2.3
428,485 + 11244 mRNA_2876 0.86 0.7
428,992 - 0.3
429,040 + 0.7
429,065 - 0.3
429,498 + -0.7
429,577 - 0.5
429,599 + -0.4
429,614 - -0.3
429,643 - 0.3
430,046 + 11245 mRNA_2877 0.27 0.3
430,091 - 11245 mRNA_2877 0.31 -0.1
430,225 + 11245 mRNA_2877 0.41 1.6
430,330 + 11245 mRNA_2877 0.48 0.5