Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2782

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2782: 11150 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 198574 to 201487 11150 mRNA_2783: 11151 - BLAST NADH dehydrogenase (ubiquinone) Fe-S protein 5 [C..., at 202335 to 202970 11151

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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197,581 + 0.7
197,609 - 0.2
197,660 - 1.5
197,676 + 0.5
197,679 + 0.1
197,687 - -0.1
197,702 + 0.2
197,721 - 1.2
197,721 + 0.6
197,746 - -0.5
197,823 + 0.0
197,828 - 1.4
197,960 - -0.3
197,971 - 0.9
197,975 - -0.3
197,976 - -0.2
197,982 + -0.3
197,986 - 0.1
197,988 - -1.1
197,990 - 0.5
198,009 + 1.1
198,010 + -1.4
198,019 - -1.2
198,023 + -0.2
198,025 - 1.5
198,139 + -1.1
198,151 + 0.6
198,159 - 0.4
198,306 - 0.1
198,310 - -0.5
198,321 + -0.2
198,331 - -1.0
198,337 + -2.2
198,468 + -0.3
198,491 + 0.5
198,510 + 1.1
199,391 - 11150 mRNA_2782 0.28 -1.2
200,132 - 11150 mRNA_2782 0.53 -0.4
201,016 + 11150 mRNA_2782 0.84 -0.6
201,285 - 0.3
201,566 - 0.3
201,864 - 0.2
201,867 - -0.2
201,877 - 0.0
201,878 + -1.0
201,878 + 2.1
201,894 + -0.9
202,018 - 0.4
202,020 + 2.1
202,030 + 1.2
202,038 - -0.5
202,041 + 1.9
202,042 + -1.3