Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2729

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2728: 11096 - Hypothetical Protein, at 89021 to 89898 11096 mRNA_2729: 11097 - KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily), at 90358 to 92251 11097 mRNA_2730: 11098 - Hypothetical Protein, at 92250 to 93018 11098 mRNA_2731: 11099 - HMMPfam-Domain of unknown function (DUF4112)-PF13430, at 93029 to 93911 11099

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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89,421 - 11096 mRNA_2728 0.46 0.1
89,520 - 11096 mRNA_2728 0.57 -1.3
89,596 + 11096 mRNA_2728 0.65 -0.1
89,608 + 11096 mRNA_2728 0.67 1.4
89,719 - 11096 mRNA_2728 0.79 -0.6
89,724 + 11096 mRNA_2728 0.80 -0.7
89,725 + 11096 mRNA_2728 0.80 -1.2
89,883 + -0.2
90,017 + -0.4
90,018 + 0.0
90,038 - -0.5
90,045 + 1.3
90,179 + 0.2
90,437 - -0.5
90,487 + 0.9
91,077 - 11097 mRNA_2729 0.38 1.0
91,087 + 11097 mRNA_2729 0.38 0.9
91,103 - 11097 mRNA_2729 0.39 1.1
92,091 - 0.8
92,205 + 0.7
92,383 - 11098 mRNA_2730 0.17 -0.3
92,385 - 11098 mRNA_2730 0.18 -0.5
92,402 + 11098 mRNA_2730 0.20 0.7
92,504 + 11098 mRNA_2730 0.33 -2.0
92,524 - 11098 mRNA_2730 0.36 -1.1
92,661 - 11098 mRNA_2730 0.53 0.1
92,671 - 11098 mRNA_2730 0.55 -0.6
92,672 - 11098 mRNA_2730 0.55 2.6
92,674 + 11098 mRNA_2730 0.55 -0.4
92,675 - 11098 mRNA_2730 0.55 1.6
92,687 - 11098 mRNA_2730 0.57 -0.1
92,691 - 11098 mRNA_2730 0.57 -0.1
92,691 - 11098 mRNA_2730 0.57 -0.8
92,695 + 11098 mRNA_2730 0.58 -1.4
92,695 + 11098 mRNA_2730 0.58 0.0
92,697 + 11098 mRNA_2730 0.58 0.1
92,697 + 11098 mRNA_2730 0.58 0.7
92,706 + 11098 mRNA_2730 0.59 0.3
92,709 - 11098 mRNA_2730 0.60 0.4
92,712 - 11098 mRNA_2730 0.60 1.6
92,715 + 11098 mRNA_2730 0.60 0.8
92,715 + 11098 mRNA_2730 0.60 -0.5
92,716 - 11098 mRNA_2730 0.61 -3.2
92,716 + 11098 mRNA_2730 0.61 0.4
92,716 + 11098 mRNA_2730 0.61 -0.0
92,716 - 11098 mRNA_2730 0.61 -0.4
92,727 + 11098 mRNA_2730 0.62 -0.2
92,731 - 11098 mRNA_2730 0.63 0.5
92,732 + 11098 mRNA_2730 0.63 0.7
92,733 + 11098 mRNA_2730 0.63 -0.4
92,785 - 11098 mRNA_2730 0.70 0.1
92,826 - 11098 mRNA_2730 0.75 0.7
92,834 - 11098 mRNA_2730 0.76 -0.6
92,841 + 11098 mRNA_2730 0.77 -0.8
92,843 - 11098 mRNA_2730 0.77 -0.9
92,862 + 11098 mRNA_2730 0.80 1.6
92,961 + -1.5
92,980 - -0.5
92,983 - -0.1
93,115 - 0.9