Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2714

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2714: 11082 - KOG2477 Uncharacterized conserved protein, at 63364 to 66371 11082 mRNA_2715: 11083 - Hypothetical Protein, at 66913 to 70114 11083

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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62,378 + 0.2
62,383 - 1.7
62,389 + 1.7
62,390 - -0.7
62,396 - 0.2
62,398 - -0.2
62,399 - 0.5
62,406 + 1.2
62,407 + -0.2
62,410 + -0.8
62,413 + -0.6
62,416 + 2.1
62,422 + -0.3
62,427 + 0.2
62,428 - -0.1
62,432 + -0.6
62,505 - -0.6
62,512 - 0.5
62,515 - 1.0
62,533 + 1.0
62,536 - -0.4
62,546 + 0.4
62,557 + 0.1
62,564 - -0.3
62,565 + 0.4
62,567 - -0.5
62,696 + -0.4
62,699 + 1.4
62,709 + 0.4
62,710 - -0.1
62,711 - -2.5
62,724 + 1.4
62,726 - -0.7
62,731 + -0.4
62,741 + 0.0
62,743 - 1.5
62,752 - -0.3
62,786 - -0.4
62,790 - 2.1
62,790 - 0.8
62,792 - 0.0
62,796 + 0.0
62,807 - -0.0
62,815 - 0.9
62,819 + 0.2
62,831 + 0.6
62,843 + 1.6
62,882 - 1.2
62,882 + -0.3
62,897 - 0.0
62,899 + -0.2
62,919 - 0.0
62,919 + 0.0
62,920 + 1.2
62,922 + 0.5
62,930 - 0.5
62,930 + -1.2
62,934 + -1.1
62,935 + 0.1
63,003 + -0.1
63,109 - 0.4
63,124 - 0.0
63,124 + 0.6
63,137 + 1.4
63,223 - 0.2
63,283 - 0.5
64,443 - 11082 mRNA_2714 0.36 -0.4
64,445 - 11082 mRNA_2714 0.36 0.4
64,768 - 11082 mRNA_2714 0.47 -0.5
64,801 + 11082 mRNA_2714 0.48 1.1
64,921 - 11082 mRNA_2714 0.52 2.3
65,158 - 11082 mRNA_2714 0.60 0.2
65,192 - 11082 mRNA_2714 0.61 1.7
65,256 + 11082 mRNA_2714 0.63 -0.4
66,052 - 11082 mRNA_2714 0.89 2.3
66,444 - 0.6
66,497 - 0.8
66,531 - 1.9
66,643 + -0.4
66,788 - -0.0
66,919 - 0.8
66,979 + 0.7
66,981 - -2.5