Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2624

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2623: 10991 - K00306 PIPOX sarcosine oxidase / L-pipecolate oxidase, at 615105 to 616887 10991 mRNA_2624: 10992 - SUPERFAMILY--SSF52058, at 616981 to 618073 10992 mRNA_2625: 10993 - K20784 XEG113 arabinosyltransferase, at 618435 to 621494 10993

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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616,188 - 10991 mRNA_2623 0.61 0.4
616,461 - 10991 mRNA_2623 0.76 -0.6
616,762 + -0.6
616,776 - 1.7
617,039 + 0.5
617,046 - 0.0
617,102 - 10992 mRNA_2624 0.11 0.1
617,180 - 10992 mRNA_2624 0.18 0.6
617,190 + 10992 mRNA_2624 0.19 -1.4
617,355 - 10992 mRNA_2624 0.34 0.2
617,361 + 10992 mRNA_2624 0.35 0.9
617,378 - 10992 mRNA_2624 0.36 -1.5
617,504 + 10992 mRNA_2624 0.48 0.9
617,505 - 10992 mRNA_2624 0.48 0.9
617,645 - 10992 mRNA_2624 0.61 1.1
617,725 - 10992 mRNA_2624 0.68 -0.4
617,726 + 10992 mRNA_2624 0.68 0.7
617,738 + 10992 mRNA_2624 0.69 0.2
617,751 - 10992 mRNA_2624 0.70 0.5
617,759 - 10992 mRNA_2624 0.71 1.2
617,760 - 10992 mRNA_2624 0.71 0.5
617,762 + 10992 mRNA_2624 0.71 0.7
617,770 + 10992 mRNA_2624 0.72 -0.0
617,771 + 10992 mRNA_2624 0.72 0.2
617,771 + 10992 mRNA_2624 0.72 1.5
617,780 - 10992 mRNA_2624 0.73 0.5
617,784 + 10992 mRNA_2624 0.73 1.2
617,786 - 10992 mRNA_2624 0.74 0.3
617,788 - 10992 mRNA_2624 0.74 -0.9
617,805 - 10992 mRNA_2624 0.75 1.0
617,826 + 10992 mRNA_2624 0.77 0.0
617,844 - 10992 mRNA_2624 0.79 1.5
617,847 + 10992 mRNA_2624 0.79 0.8
617,884 + 10992 mRNA_2624 0.83 -2.4
617,885 - 10992 mRNA_2624 0.83 -0.4
617,911 - 10992 mRNA_2624 0.85 0.3
617,914 + 10992 mRNA_2624 0.85 -0.2
617,932 - 10992 mRNA_2624 0.87 0.5
617,936 - 10992 mRNA_2624 0.87 -0.4
617,964 + -2.6
617,976 + -0.8
617,976 - -0.3
617,980 + -0.8
617,988 - 1.2
617,988 - 1.5
618,008 + -0.3
618,043 + -0.5
618,069 + 1.5
618,083 + 0.4
618,084 - 0.9
618,137 - 0.3
618,140 + 0.2
618,143 + -1.3
618,187 + 0.7
618,191 - -2.2
618,193 - 0.6
618,197 - -1.3
618,203 - 1.5
618,224 + 0.4
618,245 - -0.5
618,246 - -0.9
618,246 + -1.0
618,251 + -0.3
618,257 - 0.2
618,267 - -0.4
618,268 - 0.0
618,270 - -0.4
618,276 + -0.7
618,278 - -0.2
618,281 - -0.7
618,291 - 0.2
618,296 - -0.0
618,297 + 0.6
618,297 - -0.1
618,308 - -0.6
618,313 + 0.6
618,313 + 0.4
618,314 + 1.6
618,315 - -0.5
618,316 - 1.1
618,317 + 1.2
618,319 - 2.1
618,319 + -0.2
618,319 + -0.3
618,320 + 0.3
618,326 + 0.8
618,327 - -0.7
618,334 + 0.5
618,401 - 0.1
618,410 + 0.4
618,478 + 1.5
618,483 - 0.4
618,503 + -0.3
618,519 + -1.4
618,547 + 0.3
618,623 + -0.3
618,624 - 0.2
618,630 - -0.0
618,640 + 0.2
618,650 - 0.5
618,782 + 10993 mRNA_2625 0.11 1.6
618,795 + 10993 mRNA_2625 0.12 0.1
618,798 + 10993 mRNA_2625 0.12 1.2
618,921 + 10993 mRNA_2625 0.16 -0.6