Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2541

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2540: 10908 - SUPERFAMILY--SSF52058, at 398635 to 399613 10908 mRNA_2541: 10909 - HMMPfam-Hemerythrin HHE cation binding domain-PF01814, at 400071 to 401322 10909 mRNA_2542: 10910 - Hypothetical Protein, at 401521 to 403165 10910

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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399,077 - 10908 mRNA_2540 0.45 -0.8
399,265 - 10908 mRNA_2540 0.64 0.4
399,380 - 10908 mRNA_2540 0.76 0.3
399,434 + 10908 mRNA_2540 0.82 -0.7
399,680 - -0.7
399,681 + 0.3
399,704 + 0.0
399,808 - 1.1
399,918 + -0.5
399,975 - 0.3
400,205 + 10909 mRNA_2541 0.11 -1.3
400,264 + 10909 mRNA_2541 0.15 -1.5
401,016 + 10909 mRNA_2541 0.75 -1.3
401,290 + -0.2
401,304 + 0.9
401,423 - 0.9
401,442 - 1.0
401,444 + 0.0
401,460 + 0.3
401,469 + -0.5
401,590 + 1.6
401,639 - 0.4
402,076 + 10910 mRNA_2542 0.34 -0.2