Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2335

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2334: 10702 - K17815 EXO5 exonuclease V, at 645370 to 647887 10702 mRNA_2335: 10703 - K20098 ERCC6L2 DNA excision repair protein ERCC-6-like 2, at 648018 to 653331 10703 mRNA_2336: 10704 - KOG0254 Predicted transporter (major facilitator superfamily), at 653967 to 656080 10704

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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647,088 - 10702 mRNA_2334 0.68 0.5
647,271 + 10702 mRNA_2334 0.75 1.3
647,718 + -0.3
647,816 - -1.0
648,233 + -0.5
648,358 + -0.7
648,687 - 10703 mRNA_2335 0.13 0.1
648,707 - 10703 mRNA_2335 0.13 0.3
648,940 + 10703 mRNA_2335 0.17 0.1
648,970 + 10703 mRNA_2335 0.18 -0.0
649,378 - 10703 mRNA_2335 0.26 -0.0
649,554 - 10703 mRNA_2335 0.29 0.5
649,559 + 10703 mRNA_2335 0.29 1.5
649,865 + 10703 mRNA_2335 0.35 2.3
650,694 - 10703 mRNA_2335 0.50 -0.9
650,734 - 10703 mRNA_2335 0.51 2.1
650,874 - 10703 mRNA_2335 0.54 -0.8
651,011 + 10703 mRNA_2335 0.56 -0.6
651,012 - 10703 mRNA_2335 0.56 -0.5
651,163 - 10703 mRNA_2335 0.59 -1.1
651,175 - 10703 mRNA_2335 0.59 0.3
651,441 + 10703 mRNA_2335 0.64 0.5
652,043 + 10703 mRNA_2335 0.76 0.1
652,326 - 10703 mRNA_2335 0.81 -0.5
652,926 + 1.4
652,946 - 0.3
653,057 - 0.4
653,226 - -0.2
653,541 + -0.5
653,675 - 0.8
653,682 + 0.3
653,811 + 0.5
653,811 + 0.4
653,822 - -0.4
654,121 - -0.6
654,260 - 10704 mRNA_2336 0.14 -0.2