Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2243

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2242: 10610 - Hypothetical Protein, at 448063 to 449685 10610 mRNA_2243: 10611 - SUPERFAMILY--SSF52266, at 450168 to 452098 10611 mRNA_2244: 10612 - KOG4120 G/T mismatch-specific thymine DNA glycosylase, at 452902 to 454246 10612

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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449,241 + 10610 mRNA_2242 0.73 1.3
449,423 - 10610 mRNA_2242 0.84 1.5
449,680 + 0.7
449,698 + 0.2
449,833 + 0.5
449,996 + -0.5
450,014 - 0.7
450,306 + -1.3
450,420 + 10611 mRNA_2243 0.13 -0.1
450,572 + 10611 mRNA_2243 0.21 -0.1
450,729 - 10611 mRNA_2243 0.29 0.4
450,858 + 10611 mRNA_2243 0.36 0.0
450,871 - 10611 mRNA_2243 0.36 -0.5
450,980 + 10611 mRNA_2243 0.42 -0.1
451,016 + 10611 mRNA_2243 0.44 0.8
451,610 - 10611 mRNA_2243 0.75 -1.5
451,901 - 10611 mRNA_2243 0.90 -0.1
452,007 - -0.3
452,021 - -0.4
452,036 + -0.1
452,182 - -0.9
452,193 + -0.2
452,201 + 0.8
452,214 + -0.5
452,217 + -0.1
452,220 + 0.4
452,222 + -0.2
452,226 - -0.1
452,231 + 1.5
452,241 + 1.4
452,245 + -0.4
452,264 - 0.6
452,283 - 1.3
452,286 + 1.1
452,288 + -0.4
452,294 - 0.0
452,295 + -0.1
452,298 - 1.9
452,313 - 1.2
452,339 + 1.6
452,350 - 1.2
452,359 + 0.2
452,362 + 0.2
452,372 - 1.7
452,385 - 0.6
452,388 - 0.5
452,400 + 0.1
452,409 + -0.6
452,410 - 1.6
452,415 - 0.2
452,432 - 0.0
452,441 - 1.0
452,443 + -0.8
452,445 + 0.3
452,453 - 2.5
452,458 - 0.7
452,458 - -0.1
452,460 - 0.3
452,461 - 2.0
452,475 + 0.6
452,480 + 0.7
452,480 + 1.3
452,488 - -0.5
452,490 - -0.6
452,490 - 1.3
452,495 + 0.8
452,499 + 0.7
452,499 + 0.4
452,500 + 0.4
452,503 - -0.3
452,506 - -0.2
452,506 - 0.1
452,522 - 0.1
452,522 - 0.9
452,522 - 0.5
452,540 - 0.9
452,559 + -1.6
452,578 + 0.1
452,605 + 0.1
452,623 - -0.1
452,631 + 0.2
452,631 - 0.2
452,635 + 0.9
452,649 + -1.0
452,666 - -0.7
452,773 - -1.3
452,782 + 0.0
452,798 + 1.1
452,811 + 0.1
452,917 - -0.7
452,928 + 0.4