Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2135

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2134: 10502 - K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5, at 148859 to 150709 10502 mRNA_2135: 10503 - KOG2922 Uncharacterized conserved protein, at 150841 to 152742 10503 mRNA_2136: 10504 - K01613 psd, PISD phosphatidylserine decarboxylase, at 153030 to 154707 10504

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
149,911 + 10502 mRNA_2134 0.57 1.0
149,913 - 10502 mRNA_2134 0.57 -0.7
150,277 - 10502 mRNA_2134 0.77 -0.4
150,622 + -0.1
150,623 + -0.3
150,712 + -0.1
150,725 + 1.0
150,752 + -0.8
150,774 + -0.5
150,861 - -0.3
150,896 - -0.1
150,941 + -0.1
151,043 - 10503 mRNA_2135 0.11 -0.0
151,062 - 10503 mRNA_2135 0.12 0.1
151,089 + 10503 mRNA_2135 0.13 0.4
151,197 + 10503 mRNA_2135 0.19 2.1
151,216 + 10503 mRNA_2135 0.20 0.5
151,245 - 10503 mRNA_2135 0.21 0.6
151,478 - 10503 mRNA_2135 0.33 0.6
151,776 + 10503 mRNA_2135 0.49 1.5
151,785 - 10503 mRNA_2135 0.50 -0.5
151,881 + 10503 mRNA_2135 0.55 0.2
151,979 - 10503 mRNA_2135 0.60 0.4
152,197 + 10503 mRNA_2135 0.71 -1.0
152,238 - 10503 mRNA_2135 0.73 0.1
152,282 + 10503 mRNA_2135 0.76 -0.4
152,360 - 10503 mRNA_2135 0.80 0.9
152,650 + 0.3
152,654 - -0.8
152,664 - -0.1
152,690 - 0.3
152,693 + -1.0
152,700 + 0.1
152,764 + 1.9
152,808 - 0.4
153,117 - -0.8
153,269 + 10504 mRNA_2136 0.14 -0.7
153,307 - 10504 mRNA_2136 0.17 -1.0
153,666 - 10504 mRNA_2136 0.38 -1.3
153,673 - 10504 mRNA_2136 0.38 -0.9
153,721 - 10504 mRNA_2136 0.41 -0.4