Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1819

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1818: 10186 - Hypothetical Protein, at 286917 to 287591 10186 mRNA_1819: 10187 - K09215 OSR, ODD odd-skipped, at 287876 to 290451 10187 mRNA_1820: 10188 - Hypothetical Protein, at 290979 to 291681 10188

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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286,887 + 0.1
287,167 + 10186 mRNA_1818 0.37 0.5
287,172 - 10186 mRNA_1818 0.38 0.5
287,175 + 10186 mRNA_1818 0.38 1.5
287,196 - 10186 mRNA_1818 0.41 0.4
287,199 + 10186 mRNA_1818 0.42 0.9
287,311 - 10186 mRNA_1818 0.58 -0.9
287,331 - 10186 mRNA_1818 0.61 0.5
287,335 - 10186 mRNA_1818 0.62 0.6
287,359 - 10186 mRNA_1818 0.65 1.6
287,382 + 10186 mRNA_1818 0.69 -0.8
287,395 + 10186 mRNA_1818 0.71 -0.4
287,400 - 10186 mRNA_1818 0.72 -0.6
287,403 + 10186 mRNA_1818 0.72 -0.8
287,406 + 10186 mRNA_1818 0.72 -2.2
287,489 + 10186 mRNA_1818 0.85 0.5
287,533 + -0.4
287,645 + -1.2
287,654 - 0.4
287,656 + 2.1
287,660 - -0.1
287,712 - 0.6
287,721 + -1.1
287,778 - 0.5
287,778 + 0.1
287,778 + 1.2
287,795 + 0.4
287,803 + -0.1
287,853 - -0.6
287,967 + 0.0
287,995 - 0.6
288,007 - 0.7
288,010 + 0.0
288,014 + -0.2
288,017 - 0.4
288,018 + -1.4
288,019 + -0.2
288,037 + 1.4
288,151 + 10187 mRNA_1819 0.11 0.6
288,164 + 10187 mRNA_1819 0.11 0.1
288,171 + 10187 mRNA_1819 0.11 0.6
288,472 + 10187 mRNA_1819 0.23 -0.1
288,479 + 10187 mRNA_1819 0.23 0.7
288,497 + 10187 mRNA_1819 0.24 -0.0
288,897 + 10187 mRNA_1819 0.40 -2.0
288,900 - 10187 mRNA_1819 0.40 -0.5
289,187 + 10187 mRNA_1819 0.51 0.6
289,606 + 10187 mRNA_1819 0.67 -0.9
289,680 + 10187 mRNA_1819 0.70 0.1
289,783 - 10187 mRNA_1819 0.74 0.2
289,963 + 10187 mRNA_1819 0.81 0.7
290,007 - 10187 mRNA_1819 0.83 1.5
290,340 + 0.6
290,518 - -0.4
290,661 - -0.1
290,665 - 0.9
290,806 + 0.2
290,952 - 0.2
291,258 - 10188 mRNA_1820 0.40 0.3
291,269 - 10188 mRNA_1820 0.41 -0.2
291,271 - 10188 mRNA_1820 0.42 0.8
291,275 - 10188 mRNA_1820 0.42 0.3
291,276 - 10188 mRNA_1820 0.42 0.1
291,278 + 10188 mRNA_1820 0.43 0.4
291,281 - 10188 mRNA_1820 0.43 1.3
291,283 + 10188 mRNA_1820 0.43 0.3
291,283 - 10188 mRNA_1820 0.43 -0.4
291,289 + 10188 mRNA_1820 0.44 -0.4
291,289 + 10188 mRNA_1820 0.44 1.4
291,290 - 10188 mRNA_1820 0.44 1.1
291,297 + 10188 mRNA_1820 0.45 -0.1
291,299 + 10188 mRNA_1820 0.46 0.6
291,300 - 10188 mRNA_1820 0.46 -0.3
291,317 - 10188 mRNA_1820 0.48 -0.7
291,349 + 10188 mRNA_1820 0.53 0.2
291,352 - 10188 mRNA_1820 0.53 0.3
291,358 - 10188 mRNA_1820 0.54 0.3
291,370 + 10188 mRNA_1820 0.56 -0.8
291,371 + 10188 mRNA_1820 0.56 -1.5
291,416 - 10188 mRNA_1820 0.62 1.3
291,416 + 10188 mRNA_1820 0.62 0.4
291,437 + 10188 mRNA_1820 0.65 -0.5
291,438 + 10188 mRNA_1820 0.65 0.4