Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1788

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1787: 10155 - HMMPfam-Tctex-1 family-PF03645, at 207900 to 208690 10155 mRNA_1788: 10156 - K16368 DGK1 diacylglycerol kinase (CTP), at 208859 to 210446 10156 mRNA_1789: 10157 - K10573 UBE2A, UBC2, RAD6A ubiquitin-conjugating enzyme E2 A, at 210969 to 211922 10157

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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208,042 - 10155 mRNA_1787 0.18 1.8
208,176 - 10155 mRNA_1787 0.35 1.2
208,349 - 10155 mRNA_1787 0.57 -0.0
208,476 - 10155 mRNA_1787 0.73 -2.0
208,780 + 2.3
208,781 - 1.2
208,788 - -1.2
208,794 - -0.6
208,799 - 1.6
208,808 + 2.0
208,929 - -2.7
208,956 - -1.4
209,078 + 10156 mRNA_1788 0.14 -0.8
209,128 - 10156 mRNA_1788 0.17 -1.0
209,232 - 10156 mRNA_1788 0.23 0.6
209,245 + 10156 mRNA_1788 0.24 -1.3
209,313 + 10156 mRNA_1788 0.29 -0.2
209,527 + 10156 mRNA_1788 0.42 -1.8
209,563 - 10156 mRNA_1788 0.44 -1.1
209,970 + 10156 mRNA_1788 0.70 0.1
209,981 - 10156 mRNA_1788 0.71 -1.3
209,986 - 10156 mRNA_1788 0.71 -1.2
210,123 - 10156 mRNA_1788 0.80 -0.5
210,398 - 2.2
210,545 - 2.0
210,546 + 0.5
210,717 + 0.9
210,965 + -0.5