Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1695

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1694: 10062 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 914848 to 915614 10062 mRNA_1695: 10063 - BLAST cyclin-like F-box domain containing protein [Rhod..., at 916247 to 917394 10063 mRNA_1696: 10064 - BLAST membrane-associating domain protein [Rhizoctonia sola..., at 917668 to 919209 10064

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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915,260 - 10062 mRNA_1694 0.54 0.4
915,435 - 10062 mRNA_1694 0.77 0.2
915,436 + 10062 mRNA_1694 0.77 3.1
915,436 - 10062 mRNA_1694 0.77 0.8
915,562 + 0.5
915,842 - -1.2
915,889 - 0.4
916,132 + -1.1
916,152 + -0.6
916,311 + -0.1
916,408 - 10063 mRNA_1695 0.14 0.2
916,438 - 10063 mRNA_1695 0.17 0.6
916,579 + 10063 mRNA_1695 0.29 1.6
916,579 + 10063 mRNA_1695 0.29 -0.8
916,588 - 10063 mRNA_1695 0.30 0.4
916,691 - 10063 mRNA_1695 0.39 0.9
916,692 + 10063 mRNA_1695 0.39 -1.0
916,901 + 10063 mRNA_1695 0.57 0.7
916,979 + 10063 mRNA_1695 0.64 -1.4
917,309 - -0.1
917,316 + 0.5
917,592 - -0.0
917,682 - 1.5
917,725 - -0.4
918,024 + 10064 mRNA_1696 0.23 -0.6
918,129 + 10064 mRNA_1696 0.30 -0.4
918,218 - 10064 mRNA_1696 0.36 1.8
918,324 - 10064 mRNA_1696 0.43 0.1