Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1692

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1692: 10060 - K20292 COG5 conserved oligomeric Golgi complex subunit 5, at 908144 to 911524 10060 mRNA_1693: 10061 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 911784 to 914454 10061

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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907,279 + 1.3
907,439 + -0.1
907,724 + 0.3
907,743 - 0.1
907,886 + 2.5
908,047 - 0.7
908,054 + 1.3
908,328 - -0.3
908,586 - 10060 mRNA_1692 0.13 0.6
908,645 + 10060 mRNA_1692 0.15 0.1
908,906 + 10060 mRNA_1692 0.23 1.6
908,944 + 10060 mRNA_1692 0.24 1.3
909,024 - 10060 mRNA_1692 0.26 0.2
909,218 - 10060 mRNA_1692 0.32 2.0
909,222 + 10060 mRNA_1692 0.32 0.1
909,376 + 10060 mRNA_1692 0.36 0.1
909,807 + 10060 mRNA_1692 0.49 0.2
909,964 - 10060 mRNA_1692 0.54 1.2
910,243 - 10060 mRNA_1692 0.62 0.7
910,353 + 10060 mRNA_1692 0.65 0.7
910,368 + 10060 mRNA_1692 0.66 -0.4
910,478 + 10060 mRNA_1692 0.69 0.3
910,516 + 10060 mRNA_1692 0.70 0.9
910,700 - 10060 mRNA_1692 0.76 -0.1
911,151 - 10060 mRNA_1692 0.89 0.8
911,463 + -1.0
911,592 - 0.2
911,622 + -0.6
911,635 - 0.1
911,773 + -0.7
911,777 + 0.5
911,933 - -0.0
911,999 - -0.3
912,026 - 0.6
912,307 + 10061 mRNA_1693 0.20 1.7
912,451 - 10061 mRNA_1693 0.25 0.5