Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1620

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1619: 9987 - Hypothetical Protein, at 736290 to 737740 9987 mRNA_1620: 9988 - Hypothetical Protein, at 737944 to 741201 9988 mRNA_1621: 9989 - Hypothetical Protein, at 741895 to 743431 9989

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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737,059 + 9987 mRNA_1619 0.53 -0.1
737,069 + 9987 mRNA_1619 0.54 0.6
737,082 + 9987 mRNA_1619 0.55 0.2
737,202 - 9987 mRNA_1619 0.63 0.3
737,213 - 9987 mRNA_1619 0.64 -1.2
737,647 + -0.9
737,657 + 0.2
737,790 + 0.7
737,801 - 0.2
737,804 - 0.6
737,809 - -2.2
737,809 + -0.6
738,745 - 9988 mRNA_1620 0.25 -0.7
738,809 - 9988 mRNA_1620 0.27 0.5
740,179 + 9988 mRNA_1620 0.69 1.4
740,632 + 9988 mRNA_1620 0.83 0.1
740,995 - 2.2
741,135 + -0.8
741,505 - 0.1
741,536 + -0.1
741,662 - -1.7
741,685 + 0.2
741,689 + 1.0
741,692 - 0.5
741,693 - 0.2
741,693 - -1.1
741,696 + 0.6
741,719 - 2.6
741,719 - -0.2
741,721 + 1.7
741,759 + 0.1
741,759 - 0.2
741,768 - -0.2
741,779 + -1.3
741,888 + -0.8
741,909 + 0.3
741,921 + 0.5
741,927 - 0.9
741,952 - 0.2
742,057 + 9989 mRNA_1621 0.11 1.7
742,080 - 9989 mRNA_1621 0.12 -1.3