Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1566

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1565: 9933 - KOG1860 Nuclear protein export factor, at 604614 to 609512 9933 mRNA_1566: 9934 - Hypothetical Protein, at 610347 to 612663 9934 mRNA_1567: 9935 - KOG4129 Exopolyphosphatases and related proteins, at 612854 to 615039 9935

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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609,600 + 1.4
609,605 - 1.1
609,606 - -1.2
609,611 + 0.7
609,612 + 1.8
609,613 - 0.1
609,619 - -0.4
609,770 - -1.0
609,782 + 1.0
609,788 - -1.0
609,806 - 0.0
609,907 - 0.2
609,918 + -1.0
609,936 - -1.0
609,946 + 3.4
609,948 + -0.5
609,968 + -0.0
610,067 + -0.2
610,069 - -1.6
610,075 - -0.4
610,083 + -2.0
610,227 + 0.2
610,264 + 0.2
610,265 + 0.4
610,375 - -0.0
610,376 + 1.9
610,531 + 0.2
611,366 - 9934 mRNA_1566 0.44 0.9
611,396 + 9934 mRNA_1566 0.45 1.3
611,398 - 9934 mRNA_1566 0.45 -2.4
611,408 + 9934 mRNA_1566 0.46 0.1
611,644 + 9934 mRNA_1566 0.56 -0.1
612,380 + 9934 mRNA_1566 0.88 -0.5
612,560 + 0.6
612,707 + 0.1
612,753 - 0.7
613,277 - 9935 mRNA_1567 0.19 0.8
613,301 - 9935 mRNA_1567 0.20 -0.5