Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1545

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1544: 9912 - K08745 SLC27A1_4, FATP1, FATP4 solute carrier family 27 (fatty acid transporter), member 1/4, at 555337 to 558196 9912 mRNA_1545: 9913 - Hypothetical Protein, at 558416 to 558832 9913 mRNA_1546: 9914 - K18040 PTPN23 tyrosine-protein phosphatase non-receptor type 23, at 559318 to 562481 9914

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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557,460 - 9912 mRNA_1544 0.74 -1.1
557,461 + 9912 mRNA_1544 0.74 -2.6
557,681 - 9912 mRNA_1544 0.82 -0.7
558,268 + -0.0
558,332 - -2.5
558,349 + -0.6
558,350 - -1.3
558,483 + 9913 mRNA_1545 0.16 0.7
558,509 - 9913 mRNA_1545 0.22 0.3
558,648 + 9913 mRNA_1545 0.56 -0.7
558,781 + 9913 mRNA_1545 0.88 0.1
558,928 + 1.6
559,080 + -0.1
559,088 + 1.4
559,144 - -2.1
559,216 + -0.6
559,242 - -1.0
559,347 - -0.8
559,365 - -1.4
559,391 - -1.3
559,674 + 9914 mRNA_1546 0.11 -1.6