Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1544

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1544: 9912 - K08745 SLC27A1_4, FATP1, FATP4 solute carrier family 27 (fatty acid transporter), member 1/4, at 555337 to 558196 9912 mRNA_1545: 9913 - Hypothetical Protein, at 558416 to 558832 9913

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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554,625 - 0.4
554,631 + -0.6
554,648 + 1.6
554,774 - -1.1
554,912 - -0.9
554,937 - 1.3
554,942 - 0.4
555,088 - -1.6
555,166 - -1.4
555,230 + 1.0
555,231 + -0.4
555,231 + 0.4
555,236 + -0.8
555,237 + 3.3
555,247 - -0.0
555,249 - 1.1
555,401 - 0.1
555,412 + -0.6
555,419 - -0.6
555,433 - 0.2
555,434 + -0.2
555,564 + -0.2
555,564 - 0.3
555,710 - 9912 mRNA_1544 0.13 -0.3
555,724 - 9912 mRNA_1544 0.14 0.6
555,732 + 9912 mRNA_1544 0.14 -0.2
555,851 + 9912 mRNA_1544 0.18 -1.3
555,982 - 9912 mRNA_1544 0.23 -0.4
556,138 - 9912 mRNA_1544 0.28 1.3
556,575 - 9912 mRNA_1544 0.43 -0.3
556,589 - 9912 mRNA_1544 0.44 1.1
556,731 + 9912 mRNA_1544 0.49 2.3
556,745 - 9912 mRNA_1544 0.49 0.2
557,164 - 9912 mRNA_1544 0.64 0.2
557,315 - 9912 mRNA_1544 0.69 0.3
557,460 - 9912 mRNA_1544 0.74 -1.1
557,461 + 9912 mRNA_1544 0.74 -2.6
557,681 - 9912 mRNA_1544 0.82 -0.7
558,268 + -0.0
558,332 - -2.5
558,349 + -0.6
558,350 - -1.3
558,483 + 9913 mRNA_1545 0.16 0.7
558,509 - 9913 mRNA_1545 0.22 0.3
558,648 + 9913 mRNA_1545 0.56 -0.7
558,781 + 9913 mRNA_1545 0.88 0.1
558,928 + 1.6
559,080 + -0.1
559,088 + 1.4
559,144 - -2.1