Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1454

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1453: 9821 - HMMPfam-G-patch domain-PF01585,ProSiteProfiles-G-patch domain profile.-PS50174,SMART-glycine rich nucleic binding domain-SM00443, at 328591 to 330027 9821 mRNA_1454: 9822 - K11390 CLYBL citrate lyase subunit beta-like protein, at 330186 to 331593 9822 mRNA_1455: 9823 - BLAST patatin-like phospholipase domain protein [Rhizoctoni..., at 331786 to 334001 9823

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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329,236 + 9821 mRNA_1453 0.45 1.2
329,558 - 9821 mRNA_1453 0.67 0.7
329,681 - 9821 mRNA_1453 0.76 0.1
330,128 - -0.1
330,251 - -0.9
330,255 + -0.9
330,263 - -0.2
330,268 + 1.0
330,275 + -1.9
330,707 + 9822 mRNA_1454 0.37 0.5
331,421 + 9822 mRNA_1454 0.88 -0.1
332,302 - 9823 mRNA_1455 0.23 0.1
332,303 + 9823 mRNA_1455 0.23 0.4