Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1448

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1448: 9816 - KOG4159 Predicted E3 ubiquitin ligase, at 313855 to 315152 9816 mRNA_1449: 9817 - K03325 TC.ACR3 arsenite transporter, ACR3 family, at 315530 to 317378 9817

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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312,876 - -0.8
312,920 - -0.5
312,940 + 0.7
313,228 - -0.5
313,390 - -0.7
313,759 - -0.1
313,803 + -0.8
314,075 + 9816 mRNA_1448 0.17 0.3
314,129 + 9816 mRNA_1448 0.21 1.3
314,315 - 9816 mRNA_1448 0.35 0.9
314,325 + 9816 mRNA_1448 0.36 0.0
314,952 + 9816 mRNA_1448 0.85 -2.1
315,290 - -0.5
315,340 + -1.5
315,402 + -1.0
315,641 - 1.0
316,077 - 9817 mRNA_1449 0.30 0.9
316,091 + 9817 mRNA_1449 0.30 -0.1
316,099 + 9817 mRNA_1449 0.31 -1.1