Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1433

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1432: 9800 - K01653 E2.2.1.6S, ilvH, ilvN acetolactate synthase I/III small subunit, at 267491 to 268796 9800 mRNA_1433: 9801 - K17081 PHB2 prohibitin 2, at 269247 to 270588 9801 mRNA_1434: 9802 - Hypothetical Protein, at 270891 to 274299 9802

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
268,836 - -0.1
268,886 - -0.5
268,899 - -3.9
269,030 + -2.9
269,049 + 1.3
269,467 - 9801 mRNA_1433 0.16 1.0
269,629 + 9801 mRNA_1433 0.28 -1.9
269,773 - 9801 mRNA_1433 0.39 1.3
269,894 - 9801 mRNA_1433 0.48 -3.1
270,162 - 9801 mRNA_1433 0.68 -1.7
270,328 + 9801 mRNA_1433 0.81 -0.8
270,330 - 9801 mRNA_1433 0.81 -1.0
270,333 + 9801 mRNA_1433 0.81 -1.9
270,390 + 9801 mRNA_1433 0.85 1.8
270,484 + -0.4
270,497 + 0.2
270,644 + 0.0
270,650 - -0.5
270,774 - 0.6
270,778 + 0.8
270,927 + 0.6
270,930 + 1.7
270,930 + -1.1
271,071 - 0.9
271,090 - -0.8
271,227 - -1.1