Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1425

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1425: 9793 - HMMPfam-Protein of unknown function (DUF4449)-PF14613,SUPERFAMILY--SSF55394, at 253226 to 256985 9793 mRNA_1426: 9794 - Hypothetical Protein, at 257287 to 258707 9794

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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252,581 + -1.4
252,782 - 0.3
252,866 + 0.2
252,872 + 0.0
252,880 - 0.1
253,009 + 0.5
253,019 - 1.5
253,021 - -2.1
253,021 + -0.1
253,099 - -0.0
253,106 + 1.1
253,129 - -1.4
253,152 + 0.6
253,168 - -0.7
253,170 + -1.9
253,176 - -0.4
253,179 + 1.7
253,179 + -1.0
253,201 + -1.9
253,677 - 9793 mRNA_1425 0.12 0.6
254,649 - 9793 mRNA_1425 0.38 0.3
255,149 + 9793 mRNA_1425 0.51 -0.1
255,470 + 9793 mRNA_1425 0.60 -2.2
255,977 - 9793 mRNA_1425 0.73 0.4
255,993 + 9793 mRNA_1425 0.74 1.4
256,012 + 9793 mRNA_1425 0.74 0.6
256,048 + 9793 mRNA_1425 0.75 -1.3
256,111 + 9793 mRNA_1425 0.77 -0.4
256,259 - 9793 mRNA_1425 0.81 1.2
256,413 - 9793 mRNA_1425 0.85 0.0
256,440 - 9793 mRNA_1425 0.85 1.0
256,534 + 9793 mRNA_1425 0.88 -0.3
256,993 - -1.3
257,627 + 9794 mRNA_1426 0.24 -0.5
257,783 + 9794 mRNA_1426 0.35 -1.2