Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1415

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1414: 9782 - K19801 PI4KB phosphatidylinositol 4-kinase B, at 215225 to 219858 9782 mRNA_1415: 9783 - Hypothetical Protein, at 220710 to 221651 9783

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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219,884 + 0.1
219,903 - 0.3
219,930 - -1.4
219,944 - -0.1
219,947 + 2.9
219,948 - -0.1
219,948 - 3.3
219,956 + -1.2
220,083 - -0.6
220,088 + -0.4
220,107 + 0.7
220,205 + 0.1
220,259 - -0.1
220,357 - 0.5
220,361 - 2.1
220,367 + 1.6
220,501 + 1.6
220,527 - 0.4
220,541 - 1.1
220,541 + -0.8
220,542 - 2.0
220,666 - 0.4
220,690 + 0.9
220,826 + 9783 mRNA_1415 0.12 0.9
220,834 + 9783 mRNA_1415 0.13 1.7
221,101 - 9783 mRNA_1415 0.42 0.2
221,132 - 9783 mRNA_1415 0.45 1.0
221,152 + 9783 mRNA_1415 0.47 1.0
221,287 - 9783 mRNA_1415 0.61 -0.9
221,607 + 0.9
221,671 + 1.0
221,692 - 2.9
221,703 - -0.7
221,870 + 0.5
221,981 - 1.2
222,016 - 0.7
222,455 - 1.6
222,512 + 0.3