Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1360

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1359: 9727 - K06018 PPN1 endopolyphosphatase, at 85771 to 88302 9727 mRNA_1360: 9728 - K01054 MGLL acylglycerol lipase, at 88622 to 90157 9728 mRNA_1361: 9729 - Hypothetical Protein, at 90771 to 91579 9729

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
87,713 - 9727 mRNA_1359 0.77 0.5
87,736 + 9727 mRNA_1359 0.78 0.0
87,769 + 9727 mRNA_1359 0.79 -0.3
88,292 + -2.3
88,298 - -0.5
88,415 - -0.8
88,416 + -1.2
88,434 - 0.0
88,457 - 0.9
88,468 + -0.4
88,568 - 0.7
88,576 - 1.2
88,585 - 0.4
88,603 + -0.0
88,604 - -0.6
88,727 + -0.1
88,736 - -0.1
89,033 - 9728 mRNA_1360 0.27 -0.7
89,050 - 9728 mRNA_1360 0.28 0.4
89,355 + 9728 mRNA_1360 0.48 -0.5
89,532 + 9728 mRNA_1360 0.59 1.5
89,685 + 9728 mRNA_1360 0.69 2.0
89,697 - 9728 mRNA_1360 0.70 1.2
89,965 + 9728 mRNA_1360 0.87 0.5
90,038 + 0.4
90,068 + 0.5
90,145 - -0.5
90,242 - 0.5
90,326 - 1.5
90,328 + -0.0
90,335 - -0.1
90,349 + -0.2
90,350 + -0.0
90,356 + 0.8
90,364 + 0.2
90,374 + -0.2
90,376 - 0.3
90,378 - 0.7
90,532 - 2.1
90,534 - 0.7
90,556 + -1.2
90,568 + 0.5
90,606 - -0.5
90,696 + -2.3
90,709 + -1.1
90,822 - -0.2
90,901 - 9729 mRNA_1361 0.16 0.1
91,118 - 9729 mRNA_1361 0.43 1.0
91,123 - 9729 mRNA_1361 0.44 -0.3