Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1326

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1326: 9694 - KOG1239 Inner membrane protein translocase involved in respiratory chain assembly, at 227 to 1696 9694 mRNA_1327: 9695 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 2473 to 5541 9695

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1 + 0.6
25 + 0.6
49 - 0.2
50 + 1.7
53 + -0.7
57 - -1.0
57 + 0.7
58 - -0.1
62 + 0.6
62 - 0.1
76 + 0.7
109 + 0.9
122 + -1.0
125 - 0.8
126 + -0.3
128 - 0.1
134 + -0.2
143 + -0.0
144 + 0.5
148 + 0.1
176 - -1.1
186 + 0.5
199 + 0.5
240 + -0.8
240 + -1.0
250 + -1.4
250 + 0.2
256 - -0.4
279 + -1.5
282 + -2.6
286 - -1.6
290 + -0.5
542 - 9694 mRNA_1326 0.21 -2.4
545 + 9694 mRNA_1326 0.22 -0.4
726 - 9694 mRNA_1326 0.34 -5.9
1,007 + 9694 mRNA_1326 0.53 -4.3
1,016 - 9694 mRNA_1326 0.54 -2.9
1,322 - 9694 mRNA_1326 0.74 -2.5
1,417 - 9694 mRNA_1326 0.81 0.6
1,888 - -1.8
1,889 - -0.5
2,000 + 0.0
2,009 + 0.1
2,141 - -0.9
2,152 - 0.7
2,166 + -0.1
2,167 + -0.8
2,173 + 0.4
2,180 - 0.6
2,180 + -0.5
2,189 + 1.5
2,189 + -0.9
2,197 + -4.5
2,246 + 0.3
2,333 - -2.5
2,471 + -2.1
2,490 + -1.1