Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1286

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1285: 9653 - Interpro Ribosomal protein 60S L18 and 50S L18e 0, at 833879 to 834376 9653 mRNA_1286: 9654 - HMMPfam-short chain dehydrogenase-PF00106,SUPERFAMILY--SSF51735, at 834621 to 836012 9654 mRNA_1287: 9655 - KOG1087 Cytosolic sorting protein GGA2/TOM1, at 836321 to 838675 9655

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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833,771 + 1.0
833,803 - 2.1
833,936 - 9653 mRNA_1285 0.11 -0.1
833,994 - 9653 mRNA_1285 0.23 0.0
834,255 + 9653 mRNA_1285 0.76 0.7
834,635 - -0.2
834,672 - -0.1
834,682 + -2.2
834,838 + 9654 mRNA_1286 0.16 -0.0
834,981 + 9654 mRNA_1286 0.26 0.7
834,986 - 9654 mRNA_1286 0.26 0.2
835,095 - 9654 mRNA_1286 0.34 -0.8
835,512 - 9654 mRNA_1286 0.64 -0.3
835,976 - 0.8
836,088 + -3.4
836,091 - 1.8
836,108 - -0.3
836,110 + 0.5
836,118 - -2.2
836,120 - -0.5
836,146 + -0.9
836,257 + -0.4
836,259 + 0.5
836,273 - -0.3
836,279 - -0.1
836,283 - 0.0
836,290 + 0.7
836,292 + 0.2
836,293 + -0.6
836,294 + -0.9
836,295 - -0.6
836,300 + -0.5
836,418 - -1.3
836,581 - 9655 mRNA_1287 0.11 -2.6
836,717 + 9655 mRNA_1287 0.17 -1.7