Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1262

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1261: 9629 - K04712 DEGS sphingolipid Delta-4 desaturase, at 778890 to 780707 9629 mRNA_1262: 9630 - KOG4781 Uncharacterized conserved protein, at 780962 to 782100 9630 mRNA_1263: 9631 - K06130 LYPLA2 lysophospholipase II, at 782267 to 783226 9631

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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780,112 - 9629 mRNA_1261 0.67 -0.8
780,729 - 1.1
780,848 + 1.0
781,567 - 9630 mRNA_1262 0.53 0.4
781,776 + 9630 mRNA_1262 0.71 -0.8
781,992 - -0.5
782,011 + 1.9
782,019 + -1.2
782,057 + -0.7
782,108 + 0.5
782,129 - 0.8
782,141 - 0.3
782,148 - -0.0
782,152 - 0.9
782,156 + -0.3
782,156 - -0.3
782,158 + 1.3
782,158 + 0.1
782,170 + 0.4
782,181 - -0.2
782,227 + -1.4
782,265 - 0.5
782,344 - 0.7
782,354 - -2.0
782,909 + 9631 mRNA_1263 0.67 -1.7
783,049 - 9631 mRNA_1263 0.81 1.7
783,085 - 9631 mRNA_1263 0.85 0.3
783,098 + 9631 mRNA_1263 0.87 0.4