Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1257

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1256: 9624 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF81383, at 767980 to 768375 9624 mRNA_1257: 9625 - KOG1947 Leucine rich repeat proteins, some proteins contain F-box, at 768823 to 770242 9625 mRNA_1258: 9626 - Hypothetical Protein, at 770373 to 771317 9626

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
767,910 + 1.5
767,914 - 0.8
768,001 + 0.9
768,011 + -1.5
768,383 - -0.2
768,531 - -2.0
768,537 + 0.9
768,631 + 0.7
768,753 + -0.4
768,768 + -0.5
769,036 - 9625 mRNA_1257 0.15 1.5
769,095 - 9625 mRNA_1257 0.19 0.1
769,212 + 9625 mRNA_1257 0.27 0.5
769,362 - 9625 mRNA_1257 0.38 0.5
769,369 + 9625 mRNA_1257 0.38 0.6
769,371 - 9625 mRNA_1257 0.39 -0.4
769,398 - 9625 mRNA_1257 0.40 1.8
769,450 + 9625 mRNA_1257 0.44 0.1
769,512 - 9625 mRNA_1257 0.49 -1.6
769,541 + 9625 mRNA_1257 0.51 -1.1
769,692 - 9625 mRNA_1257 0.61 -0.0
769,693 + 9625 mRNA_1257 0.61 -1.5
769,695 + 9625 mRNA_1257 0.61 -0.1
769,950 + 9625 mRNA_1257 0.79 0.3
769,983 - 9625 mRNA_1257 0.82 1.7
770,068 + 9625 mRNA_1257 0.88 1.5
770,267 + -0.5
770,409 - 2.2