Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1246

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1245: 9613 - HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481, at 741721 to 743435 9613 mRNA_1246: 9614 - SUPERFAMILY--SSF52047, at 743488 to 744876 9614 mRNA_1247: 9615 - Hypothetical Protein, at 745328 to 746839 9615

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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742,513 + 9613 mRNA_1245 0.46 -0.9
742,646 + 9613 mRNA_1245 0.54 1.4
742,835 + 9613 mRNA_1245 0.65 -0.4
743,305 + 0.0
744,164 - 9614 mRNA_1246 0.49 -0.5
744,245 - 9614 mRNA_1246 0.54 0.6
744,375 + 9614 mRNA_1246 0.64 2.4
744,488 + 9614 mRNA_1246 0.72 0.8
744,505 - 9614 mRNA_1246 0.73 1.4
744,790 + 0.2
745,087 + 2.5
745,094 + 1.7
745,098 + -0.7
745,100 - -1.7
745,810 + 9615 mRNA_1247 0.32 1.0
745,840 + 9615 mRNA_1247 0.34 -1.3