Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1234

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1233: 9601 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 713188 to 714152 9601 mRNA_1234: 9602 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 714659 to 715622 9602 mRNA_1235: 9603 - K12818 DHX8, PRP22 ATP-dependent RNA helicase DHX8/PRP22, at 716185 to 721769 9603

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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714,308 + -0.7
714,355 + 2.1
714,888 - 9602 mRNA_1234 0.24 -0.1
715,254 - 9602 mRNA_1234 0.62 0.4
715,486 - 9602 mRNA_1234 0.86 -0.6
715,639 - -1.0
715,734 + 0.5
715,921 - 0.4
715,929 - 1.4
716,273 + -0.8
716,350 + -0.5
716,364 - -0.9
716,420 - -1.0
716,421 + -1.1
716,527 - -0.5