Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1198

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1197: 9565 - KOG2385 Uncharacterized conserved protein, at 628765 to 631426 9565 mRNA_1198: 9566 - Hypothetical Protein, at 631655 to 633710 9566 mRNA_1199: 9567 - K02325 POLE2 DNA polymerase epsilon subunit 2, at 634120 to 636519 9567

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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631,105 - 9565 mRNA_1197 0.88 0.3
631,247 - -0.7
631,259 + -0.7
631,508 - -1.2
631,666 - -0.2
632,018 + 9566 mRNA_1198 0.18 -0.8
632,544 - 9566 mRNA_1198 0.43 -0.5
632,569 + 9566 mRNA_1198 0.44 0.7
632,879 + 9566 mRNA_1198 0.60 -0.3
632,881 + 9566 mRNA_1198 0.60 -2.3
632,979 - 9566 mRNA_1198 0.64 1.3
633,131 + 9566 mRNA_1198 0.72 0.5
633,295 - 9566 mRNA_1198 0.80 0.4
633,296 + 9566 mRNA_1198 0.80 0.9
633,316 - 9566 mRNA_1198 0.81 1.1
633,715 - 0.1
633,716 + -0.4
633,716 + 0.0
633,753 - -0.1
634,029 + -0.2
634,044 - -2.1
634,048 - -2.1
634,049 + -0.3
634,071 + 1.4