Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1164

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1163: 9531 - KOG1378 Purple acid phosphatase, at 549366 to 551873 9531 mRNA_1164: 9532 - Hypothetical Protein, at 552710 to 552960 9532 mRNA_1165: 9533 - HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920, at 553391 to 554372 9533

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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551,802 - -0.4
551,900 - 2.5
552,323 + 0.3
552,338 - -0.3
552,354 + -0.6
552,650 + 0.6
552,697 - 1.0
552,701 + 2.3
552,761 + 9532 mRNA_1164 0.20 -0.4
552,777 - 9532 mRNA_1164 0.27 -0.7
552,788 - 9532 mRNA_1164 0.31 -0.4
552,789 - 9532 mRNA_1164 0.31 0.4
552,824 + 9532 mRNA_1164 0.45 0.5
552,848 - 9532 mRNA_1164 0.55 0.1
552,853 + 9532 mRNA_1164 0.57 0.0
553,116 - 1.7
553,137 - 0.8
553,157 + -0.4
553,161 + 2.5
553,270 + -0.5
553,272 - -1.0
553,435 - -0.2
553,528 - 9533 mRNA_1165 0.14 -0.8
553,595 - 9533 mRNA_1165 0.21 -1.7
553,726 + 9533 mRNA_1165 0.34 -2.3
553,732 - 9533 mRNA_1165 0.35 1.5