Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1145

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1144: 9512 - K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial, at 510566 to 511961 9512 mRNA_1145: 9513 - K00669 AANAT arylalkylamine N-acetyltransferase, at 512734 to 513942 9513 mRNA_1146: 9514 - K06682 TEM1 Gtp-binding protein of the ras superfamily involved in termination of M-phase, at 514392 to 515549 9514

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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511,917 + 0.4
511,961 - -1.8
512,074 + -0.6
512,088 + -0.2
512,095 + -1.0
512,226 + -1.9
512,228 + -1.0
512,356 - 0.1
512,392 + 0.3
512,396 + -0.1
512,427 + 0.0
512,429 - -2.6
512,431 + 0.9
512,529 + -0.9
512,815 + 2.9
513,390 - 9513 mRNA_1145 0.54 0.4
513,597 - 9513 mRNA_1145 0.71 1.2
513,690 - 9513 mRNA_1145 0.79 1.0
513,716 + 9513 mRNA_1145 0.81 -3.2
513,986 - 0.3
514,131 + 0.2
514,134 - -0.4
514,675 + 9514 mRNA_1146 0.24 -1.3
514,721 - 9514 mRNA_1146 0.28 0.2
514,858 - 9514 mRNA_1146 0.40 1.3
514,859 + 9514 mRNA_1146 0.40 -0.1
514,864 - 9514 mRNA_1146 0.41 0.7
514,874 - 9514 mRNA_1146 0.42 0.1
514,895 - 9514 mRNA_1146 0.43 -0.4