Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1099

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1098: 9466 - Hypothetical Protein, at 400435 to 400998 9466 mRNA_1099: 9467 - K08515 VAMP7 vesicle-associated membrane protein 7, at 401360 to 402298 9467 mRNA_1100: 9468 - K14679 TRL1 tRNA ligase, at 402585 to 405523 9468

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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400,535 + 9466 mRNA_1098 0.18 4.0
400,656 - 9466 mRNA_1098 0.39 0.7
400,657 + 9466 mRNA_1098 0.39 0.2
400,822 + 9466 mRNA_1098 0.69 -0.3
400,947 + -0.2
401,091 - 0.8
401,112 + 0.3
401,123 - -1.5
401,126 - -0.7
401,130 + 0.6
401,252 - -0.0
401,283 - -0.4
401,300 + 1.1
401,537 + 9467 mRNA_1099 0.19 0.8
401,551 + 9467 mRNA_1099 0.20 0.8
401,577 - 9467 mRNA_1099 0.23 -0.4
402,490 + -5.3