Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1079

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1078: 9446 - K00784 rnz ribonuclease Z, at 359854 to 363039 9446 mRNA_1079: 9447 - HMMPfam-Frag1/DRAM/Sfk1 family-PF10277, at 363349 to 364713 9447 mRNA_1080: 9448 - Hypothetical Protein, at 364983 to 366147 9448

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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363,094 - -1.1
363,097 - 0.4
363,108 + 0.9
363,131 - 1.8
363,145 + -0.3
363,146 + 2.2
363,156 + 2.0
363,288 + -1.4
363,601 + 9447 mRNA_1079 0.18 -1.0
363,667 + 9447 mRNA_1079 0.23 1.1
363,762 + 9447 mRNA_1079 0.30 -0.3
363,769 - 9447 mRNA_1079 0.31 0.4
363,772 + 9447 mRNA_1079 0.31 -1.3
363,982 + 9447 mRNA_1079 0.46 0.5
364,029 + 9447 mRNA_1079 0.50 -0.6
364,030 - 9447 mRNA_1079 0.50 3.3
364,379 - 9447 mRNA_1079 0.75 -0.6
364,603 + 1.1
364,938 - 0.2
365,063 + -1.0
365,322 + 9448 mRNA_1080 0.29 -0.0