Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1059

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1058: 9426 - HMMPfam-Protein of unknown function (DUF1115)-PF06544,PIRSF--PIRSF038021,SUPERFAMILY--SSF54495, at 298923 to 300090 9426 mRNA_1059: 9427 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 300871 to 301562 9427 mRNA_1060: 9428 - K01530 E3.6.3.1 phospholipid-translocating ATPase, at 301806 to 307768 9428

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
299,927 - 9426 mRNA_1058 0.86 1.5
299,927 - 9426 mRNA_1058 0.86 -2.0
300,002 + 0.0
300,087 - 0.4
300,088 + 0.1
300,097 + -0.2
300,104 - -0.3
300,110 - -0.2
300,114 - -0.1
300,125 + -0.0
300,126 + -0.3
300,286 + -0.1
300,699 - 0.1
300,705 - -2.2
300,955 - 9427 mRNA_1059 0.12 -0.7
300,969 - 9427 mRNA_1059 0.14 0.2
300,971 + 9427 mRNA_1059 0.14 -0.9
301,129 - 9427 mRNA_1059 0.37 -1.4
301,132 + 9427 mRNA_1059 0.38 -0.8
301,542 + 0.2
301,545 - -0.5
301,559 - 0.6
301,566 + 0.1
301,566 + -1.5
301,566 + -1.7
301,574 + 0.6
301,582 + 0.3
301,582 + -1.1
301,582 + 2.6
301,582 + -1.4
301,585 + -1.3
301,587 + -1.1
301,589 - -0.6
301,737 - 0.1
301,821 - 0.3
302,015 + 0.6
302,097 - -1.3
302,146 - 0.3
302,152 + -0.8
302,221 - 1.0
302,479 + 9428 mRNA_1060 0.11 -1.0
302,506 - 9428 mRNA_1060 0.12 1.5
302,510 + 9428 mRNA_1060 0.12 0.5
302,554 + 9428 mRNA_1060 0.13 -2.1