Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1043

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1042: 9410 - Hypothetical Protein, at 261583 to 262732 9410 mRNA_1043: 9411 - K16732 PRC1 protein regulator of cytokinesis 1, at 262893 to 265321 9411

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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261,911 + 9410 mRNA_1042 0.29 0.9
261,932 + 9410 mRNA_1042 0.30 -1.0
261,932 - 9410 mRNA_1042 0.30 -0.2
262,106 - 9410 mRNA_1042 0.45 -1.8
262,110 + 9410 mRNA_1042 0.46 -0.5
262,255 - 9410 mRNA_1042 0.58 -0.3
262,414 - 9410 mRNA_1042 0.72 -0.3
262,419 - 9410 mRNA_1042 0.73 -0.5
262,421 + 9410 mRNA_1042 0.73 -0.1
262,427 - 9410 mRNA_1042 0.73 -0.3
262,582 - 9410 mRNA_1042 0.87 -0.1
262,588 + 9410 mRNA_1042 0.87 0.9
262,624 - -0.0
262,720 + -0.0
262,733 + 0.7
262,851 + -1.5
262,854 - -0.5
263,005 - 0.2
263,027 + 0.8
263,273 - 9411 mRNA_1043 0.16 0.3
263,411 - 9411 mRNA_1043 0.21 -0.2
263,579 - 9411 mRNA_1043 0.28 -0.2
263,750 - 9411 mRNA_1043 0.35 1.2
263,752 - 9411 mRNA_1043 0.35 -2.2
263,781 + 9411 mRNA_1043 0.37 -0.3
263,878 - 9411 mRNA_1043 0.41 0.7
264,025 + 9411 mRNA_1043 0.47 0.5
264,037 - 9411 mRNA_1043 0.47 0.2
264,040 - 9411 mRNA_1043 0.47 -0.3
264,149 + 9411 mRNA_1043 0.52 -0.3
264,220 - 9411 mRNA_1043 0.55 1.6
264,223 + 9411 mRNA_1043 0.55 -1.1
264,609 + 9411 mRNA_1043 0.71 -1.8
264,611 + 9411 mRNA_1043 0.71 0.2
264,615 + 9411 mRNA_1043 0.71 -1.2
264,891 - 9411 mRNA_1043 0.82 1.0
264,996 - 9411 mRNA_1043 0.87 1.3
265,204 - -0.0
265,331 - -1.0
265,474 - 1.1
265,496 + 0.2
265,622 + -0.3
265,641 - 0.2
265,724 - 1.0
265,824 + -0.3
266,093 + -2.0