Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1030

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1029: 9397 - SMART-N-terminal domain of CBF1 interacting co-repressor CIR-SM01083, at 240232 to 241544 9397 mRNA_1030: 9398 - Hypothetical Protein, at 241956 to 242588 9398

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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241,178 + 9397 mRNA_1029 0.72 0.3
241,601 - 0.2
241,609 + -0.7
241,740 - 0.2
241,929 + -2.1
242,031 - 9398 mRNA_1030 0.12 0.7
242,077 - 9398 mRNA_1030 0.19 -0.2
242,080 - 9398 mRNA_1030 0.20 -0.8
242,162 - 9398 mRNA_1030 0.33 0.6
242,348 - 9398 mRNA_1030 0.62 0.3
242,355 - 9398 mRNA_1030 0.63 -0.3
242,903 - 1.4
242,932 + -0.2
243,494 - 0.4