Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1029

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1028: 9396 - HMMPfam-Domain of unknown function (DUF2411)-PF10304,SUPERFAMILY--SSF48371, at 236228 to 240194 9396 mRNA_1029: 9397 - SMART-N-terminal domain of CBF1 interacting co-repressor CIR-SM01083, at 240232 to 241544 9397 mRNA_1030: 9398 - Hypothetical Protein, at 241956 to 242588 9398

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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239,470 - 9396 mRNA_1028 0.82 0.7
240,729 - 9397 mRNA_1029 0.38 0.8
240,740 + 9397 mRNA_1029 0.39 -0.1
241,178 + 9397 mRNA_1029 0.72 0.3
241,601 - 0.2
241,609 + -0.7
241,740 - 0.2
241,929 + -2.1
242,031 - 9398 mRNA_1030 0.12 0.7
242,077 - 9398 mRNA_1030 0.19 -0.2
242,080 - 9398 mRNA_1030 0.20 -0.8
242,162 - 9398 mRNA_1030 0.33 0.6
242,348 - 9398 mRNA_1030 0.62 0.3
242,355 - 9398 mRNA_1030 0.63 -0.3