Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1003

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1003: 9371 - HMMPfam-Protein of unknown function (DUF2841)-PF11001, at 179508 to 182769 9371

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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178,602 + 0.8
179,177 - 1.3
179,328 - 1.6
179,351 - -0.1
179,383 + 1.6
179,612 + 0.3
179,646 + 2.5
179,903 + 9371 mRNA_1003 0.12 0.0
180,267 - 9371 mRNA_1003 0.23 0.8
180,571 - 9371 mRNA_1003 0.33 1.7
180,849 + 9371 mRNA_1003 0.41 0.1
180,952 - 9371 mRNA_1003 0.44 -1.0
180,985 + 9371 mRNA_1003 0.45 0.9
181,125 - 9371 mRNA_1003 0.50 1.8
181,232 + 9371 mRNA_1003 0.53 2.0
181,386 - 9371 mRNA_1003 0.58 1.0
181,465 + 9371 mRNA_1003 0.60 1.7
181,527 + 9371 mRNA_1003 0.62 2.0
181,540 - 9371 mRNA_1003 0.62 1.2
181,548 + 9371 mRNA_1003 0.63 0.6
181,686 + 9371 mRNA_1003 0.67 2.4
181,841 - 9371 mRNA_1003 0.72 0.9
182,151 - 9371 mRNA_1003 0.81 0.7
182,263 - 9371 mRNA_1003 0.84 1.6
182,295 + 9371 mRNA_1003 0.85 0.3
182,295 - 9371 mRNA_1003 0.85 2.1
182,317 + 9371 mRNA_1003 0.86 1.2
182,319 + 9371 mRNA_1003 0.86 1.2
182,431 + 9371 mRNA_1003 0.90 0.7
182,716 + 1.5
183,007 - 0.2
183,017 - 0.4
183,152 - 0.6
183,162 + 0.0
183,177 + 0.8
183,295 + 0.0
183,349 - -0.3
183,351 - 0.9
183,354 - 0.9
183,356 - -1.3
183,358 + 0.1
183,365 + -1.3
183,367 - -0.7
183,367 - 0.9
183,367 - 0.3
183,367 - 0.9
183,369 + -0.1
183,369 - -1.6
183,373 + 1.3
183,382 + 0.3
183,384 + -0.5
183,404 + 0.3
183,498 + -0.2
183,515 - 0.4
183,520 - 1.0
183,537 - -0.7
183,679 - -1.1
183,702 - 0.7
183,702 - -0.9