Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_957

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_956: 9324 - KOG2466 Uridine permease/thiamine transporter/allantoin transport, at 64037 to 66119 9324 mRNA_957: 9325 - K07160 K07160 UPF0271 protein, at 67059 to 67959 9325 mRNA_958: 9326 - K14541 DUR1 urea carboxylase / allophanate hydrolase, at 68505 to 72950 9326

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
66,238 + 0.4
66,268 + -1.9
66,282 - 0.4
66,323 + -0.3
66,333 - 2.0
66,359 - -0.6
66,367 + -0.8
66,375 - 0.0
66,382 + 0.5
66,418 - -1.7
66,676 - -0.0
66,676 + -4.0
66,693 + 2.2
66,701 - -0.5
66,812 + 0.4
66,836 + -0.1
66,842 - 0.6
66,891 + -0.5
66,892 - -1.3
66,962 - -0.9
66,972 + -0.2
67,008 + -0.1
67,126 + 0.1
67,126 + 0.1
67,135 + -0.4
67,269 - 9325 mRNA_957 0.23 0.3
67,390 - 9325 mRNA_957 0.37 0.3
67,540 - 9325 mRNA_957 0.53 -2.7
67,541 + 9325 mRNA_957 0.53 -0.2
67,567 - 9325 mRNA_957 0.56 -0.7
67,590 + 9325 mRNA_957 0.59 -0.1
67,706 + 9325 mRNA_957 0.72 1.1
67,709 - 9325 mRNA_957 0.72 0.1
67,719 - 9325 mRNA_957 0.73 0.8
67,751 + 9325 mRNA_957 0.77 1.3
68,023 - 1.8
68,047 + -1.4
68,132 + -0.8
68,141 - -0.5
68,156 + -0.3
68,166 - 0.8
68,167 - 0.4
68,189 - -1.2
68,340 - -0.9
68,448 - -0.9
68,470 - -0.3
68,476 + -1.4
68,493 + -0.3
68,624 - 0.3
68,680 - -1.7
68,727 - -1.9
68,784 + 1.1
68,882 + 0.6
68,917 + -1.0
68,930 + 2.5