Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_930

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_930: 9298 - K00861 RFK, FMN1 riboflavin kinase, at 359 to 1600 9298 mRNA_931: 9299 - K14794 RRP12 ribosomal RNA-processing protein 12, at 1838 to 6021 9299

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1 + 0.2
1 + -0.9
1 + 2.1
1 + -0.3
1 + -0.0
2 + 0.5
2 + -1.9
5 + 1.0
18 + 0.4
30 + 0.0
37 + 0.6
37 + 1.8
41 + 0.6
42 + 0.2
44 + -0.1
49 + 0.9
49 + -1.5
50 + 0.8
54 + 1.1
58 - -0.1
60 - -0.5
60 + 0.4
60 - -0.3
61 - 3.6
61 + -0.9
63 + -0.4
63 + -0.6
63 + 0.4
63 + 1.9
63 + 1.0
63 + 0.6
64 + -1.9
66 - 0.1
66 + 0.8
70 + 0.3
70 + -0.5
70 - 0.6
71 + 0.8
73 + 1.2
75 - -1.0
77 - -1.5
78 + 2.6
78 - -2.1
78 + -0.8
78 + -0.7
78 + -0.4
78 + -1.4
78 + 0.0
78 + -1.1
78 + 0.9
79 + -1.6
81 - 0.7
81 - -1.7
82 + 0.7
85 + 2.0
104 + 0.3
126 + -0.3
126 + 0.7
128 - 0.5
135 + 0.7
142 + 1.5
150 + -0.8
154 + 0.4
157 + -1.5
171 - -0.5
171 + -1.2
172 + 1.7
172 + 0.3
175 - -2.2
176 - 0.5
177 - 1.5
177 - -0.1
191 - 1.4
192 + 0.4
192 + -1.3
192 + 0.3
193 + 3.7
193 + -1.3
193 + 1.7
198 - -0.3
218 + 0.9
225 + -0.8
235 + -0.2
242 + -0.8
263 - -0.4
293 + -1.0
303 + 0.2
333 - -0.8
339 - -1.9
348 + 0.2
349 + 1.9
377 - 1.5
381 - 2.1
469 + -0.6
487 - 9298 mRNA_930 0.10 -0.1
722 + 9298 mRNA_930 0.29 -0.3
1,641 - 1.2
1,656 - 0.6
1,768 - -2.8
1,778 - -0.4
1,794 + 2.2